The traits of the plant growth promoting acetic acid bacterium, Nguyenibacter vanlangensis

Huong Thi Lan Vu; Van Thi Thu Bui; Uyen Thi Tu Bui; Pattaraporn Yukphan; Sukunphat Malimas; Nam Phuong Kieu; Yuki Muramatsu; Somboon Tanasupawat; Binh Thanh Le; Yuzo Yamada; Naoto Tanaka

doi:10.15625/2525-2518/57/4/13523

Author affiliations

Authors

Huong Thi Lan Vu Faculty of Biology and Biotechnology, University of Science, Vietnam National University-HCM City, 227 Nguyen Van Cu Street, Ward 4, District 5, Ho Chi Minh City, Viet Nam
Van Thi Thu Bui Faculty of Biology and Biotechnology, University of Science, Vietnam National University-HCM City, 227 Nguyen Van Cu Street, Ward 4, District 5, Ho Chi Minh City, Viet Nam
Uyen Thi Tu Bui Faculty of Biology and Biotechnology, University of Science, Vietnam National University-HCM City, 227 Nguyen Van Cu Street, Ward 4, District 5, Ho Chi Minh City, Viet Nam
Pattaraporn Yukphan BIOTEC Culture Collection (BCC), National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 113 Thailand Science Park, Phaholyothin Road, Klong 1, Klong Luang, Pathumthani 12120, Thailand
Sukunphat Malimas Rungrueng-Fertilizer.co, Ltd. 207/5 Moo1, Nong Ya, Muang Kanchanaburi, Kanchanaburi, 71000, Thailand
Nam Phuong Kieu Faculty of Biology and Biotechnology, University of Science, Vietnam National University-HCM City, 227 Nguyen Van Cu Street, Ward 4, District 5, Ho Chi Minh City, Viet Nam
Yuki Muramatsu NITE Biological Resource Center, National Institute of Technology and Evaluation, 2-5-8 Kazusa-Kamatari, Kisarazu, Chiba 292-0818, Japan
Somboon Tanasupawat Department of Biochemistry and Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, 254 Phayathai Road, Wangmai, Pathumwan, Bangkok 10330, Thailand
Binh Thanh Le Graduate University of Science and Technology, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Street, Cau Giay District, Ha Noi, Viet Nam
Yuzo Yamada BIOTEC Culture Collection (BCC), National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 113 Thailand Science Park, Phaholyothin Road, Klong 1, Klong Luang, Pathumthani 12120, Thailand
Naoto Tanaka Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya-ku, Tokyo 156-8502, Japan

DOI:

https://doi.org/10.15625/2525-2518/57/4/13523

Keywords:

Nguyenibacter vanlangensis, Plant Growth Promoting Bacteria, Acetobateraceae

Abstract

Two Nguyenibacter vanlangensis strains TN01LGI^T and VTH-AC01 isolated by an enrichment approach using nitrogen free LGI medium from Asian rice isolation sources are expected as an additional PGPB within the Acetobacteraceae family. In this study, nitrogen fixing capability of the two N. vanlangensis strains was confirmed through nitrogenase activity’s detection by acetylene reduction analysis...

Downloads

Download data is not yet available.

References

Alam, S., Khalil, S., Ayub, N., Rashid, M. (2002). In vitro solubilization of inorganic phosphate by phosphate solubilizing microorganisms (PSM) from maize rhizosphere. International Journal of Agriculture and Biology 4 (4):454-458.

Bashan, Y., de-Bashan, L.E. (2005) Plant growth-promoting. In: Hillel, D. (Ed.), Encyclopedia of Soils in the Environment, vol. 1. Elsevier, Oxford, U.K., pp. 103–115.

Beilmann, A., Albrecht, K., Schultze, S., Wanner, G., and Pfitzner, U. M. (1992). Activation of a truncated PR-1 promoter by endogenous enhancers in transgenic plants. Plant Molecular Biology 18:65-78.

Cavalcante, V.A. and Döbreiner, J. (1988). A new acid-tolerant nitrogen-fixing bacterium associated with sugar cane. Plant and Soil 108: 23-31.

Cleenwerck, I., De Wachter, M., González, Á., De Vuyst, L. and De Vos, P. (2009). Differentiation of species of the family Acetobacteraceae by AFLP DNA fingerprinting: Gluconacetobacter kombuchae is a later heterotypic synonym of Gluconacetobacter hansenii. Internationl Journal of Systematic and Evolutionary Microbiology 59: 1771-1786.

Compant, S., Duffy, B., Nowak, J., Clément, C., Barka, E.A., (2005). Use of plant growth-promoting bacteria for biocontrol of plant diseases: principles, mechanisms of action, and future prospects. Applied and Environmental Microbiology 71: 4951-4959.

dos Santos, C.C.R., Perin, L., Baldani, J.I., Reis, V.M. (2006). Isolation of Gluconacetobacter spp. in different soil types. Pesquisa Agropecuária Brasileira 41:85-92.

Dutta, D. and Gachhui, R. (2006). Novel nitrogen-fixing Acetobacter nitrogenifigens sp. nov., isolated from Kombucha tea. Internationl Journal of Systematic and Evolutionary Microbiology 56: 1899-1903.

Dutta, D. and Gachhui, R. (2007). Nitrogen-fixing and cellulose-producing Gluconacetobacter kombuchae sp. nov., isolated from Kombucha tea. International Journal of Systematic and Evolutionary Microbiology 57: 353-357.

Fuentes-Ramírez, L.E., Bustillos-Cristales, R., Tapía-Hernández, A., Jiménez-Salgado, T., Wang, E.T., Martínez-Romero, E. and Caballero-Mellado, J. (2001). Novel nitrogen-fixing acetic acid bacteria, Gluconacetobacter johannae sp. nov. and Gluconacetobacter azotocaptans sp. nov., associated with coffee plants. International Journal of Systematic and Evolutionary Microbiology 51: 1305-1314.

Gillis, M., Kersters, K., Hoste, B., Janssens, D., Kroppenstedt, R.M., Stephan, M.P., Teixeira, K.R.S., Döbereiner, J. and De Ley, J. (1989). Acetobacter diazotrophicus sp. nov., a nitrogen-fixing acetic acid bacterium associated with sugarcane. International Journal of Systematic Bacteriology 39: 361-364.

Gordon, S.A., Weber, R.P. (1951). Colorimetric estimation of indoleacetic acid. Plant Physiology 26:192-195.

Huong, V.T.L., Yukphan, P., Muramatsu, Y., Thao, D.T.P., Tanaka, N., Ho, P.T., Yamada, Y. (2016). The microbial diversity of acetic acid bacteria in the south of Vietnam, Journal of Biotechology 14 (1A):397-408.

Iniguez, A.L., Dong, Y., Carter, H.D., Ahmer, B.M.M., Stone, J.M., Triplett, E.W. (2004). Regulation of enteric endophytic bacterial colonization by plant defenses. Molecular Plant-Microbe Interactions 18: 169-178.

Jiménez-Salgado, T., Fuentes-Ramírez, L.E., Tapia-Hernández, A., Mascarúa-Esparza, M.A., Martínez- Romero, E., Caballero-Mellado, J. (1997). Coffea arabica L., a new host plant for Acetobacter diazotrophicus, and isolation of other nitrogen-fixing acetobacteria. Applied Environmental Microbiology 63:3676-3683.

Komagata, K., Iino, T. and Yamada, Y. (2014). The family Acetobacteraceae. In: E. Rosenberg, E.F. De Long, S. Lory, E. Stackebrandt and F. Thompson (eds.) The Prokaryotes. 2014. Alphaproteobacteria and Betaproteobacteria. Springer, New York, pp 3-78.

Loganathan, P., Sunita, R., Parida, A.K., Nair, S. (1999). Isolation and characterization of two genetically distant groups of Acetobacter diazotrophicus from new host plant Eleusine coracana L. Journal of Applied Microbiology 87:167-172.

Loganathan, P. and Nair, S. (2004). Swaminathania salitolerans gen. nov., sp. nov., a salt-tolerant, nitrogen-fixing and phosphate-solubilizing bacterium from wild rice (Porteresia coarctata Tateoka). Internationl Journal of Systematic and Evolutionary Microbiology 54: 1185-1190.

Madhaiyan, M., Saravanan, V.S., Bhakiya, S.S.J.D., Lee, H.S., Thenmozhi, R., Hari. K., Sa, T.M., (2004). Occurrence of Gluconacetobacter diazotrophicus in tropical and subtropical plants of Western Ghats, India. Microbiological Research 159:233-243.

Mehnaz, S., Weselowski, B., Lazarovits, G. (2006) Isolation and identification of Gluconacetobacter azotocaptans from corn rhizosphere. Systematic Applied Microbiology 29:496-501.

Mehnaz, S., Lazarovits, G. (2005). Inoculation effects of Pseudomonas putida, Gluconacetobacter azotocaptans, and Azospirillum lipoferum on corn plant growth under greenhouse conditions. Microbial Ecology 51:326-335.

Muthukumarasamy, R., Revathi, G., Lakshminarasimhan, C. (1999). Influence of N fertilisation on the isolation of Acetobacter diazotrophicus and Herbaspirillum spp. from Indian sugarcane varieties. Biology Fertility of Soils 29:157-164.

Muthukumarasamy, R., Cleenwerck, I., Revathi, G., Vadivelu, M., Janssens, D., Hoste, B., Gum, K.U., Park, K.D., Son, C.Y., Sa, T., Caballero-Mellado, J. (2005). Natural association of Gluconacetobacter diazotrophicus and diazotrophic Acetobacter peroxydans with wetland rice. Systematic Applied Microbiology 28:277-286.

Nishijima, M., Tazato, N., Handa, Y., Tomita, J., Kigawa, R., Sano, C. and Sugiyama, J. (2013). Gluconacetobacter tumulisoli sp. nov., Gluconacetobacter takamatsuzukensis sp. nov. and Gluconacetobacter aggeris sp. nov., isolated from Takamatsuzuka Tumulus samples before and during the dismantling work in 2007. International Journal of Systematic and Evolutionary Microbiology 63: 3981-3988.

Patten, C., Glick, B. (2002). Role of Pseudomonas putida indoleacetic acid in development of the host plant root system. Applied and Environmental Microbiology 68: 3795-3801.

Paula, M.A., Reis V.M., Döbereiner J. (1991). Interactions of Glomus clarum with Acetobacter diazotrophicus in infection of sweet potato (Ipomoea batatas), sugarcane (Saccharum spp.), and sweet sorghum (Sorghum vulgare). Biology Fertility of Soils 11:111–115.

Pedraza, R.O. (2008). Recent advances in nitrogen-fixing acetic acid bacteria. International Journal of Food Microbiology 125:25-35.

Pedraza, R.O. (2016). Acetic acid bacteria as plant growth promoters. In: Matsushita, K., Toyama, H., Tonouchi, N., and Okamoto-Kainuma, A. (eds.) Acetic acid bacteria ecology and physiology. Springer, Japan, pp 101-120.

Piñón, D., Casas, M., Blanch, M., Fontaniella, B., Blanco, Y., Vicente, C., Solas, M.T., Legaz, M.E., 2002. Gluconacetobacter diazotrophicus, a sugar cane endosymbiont, produces a bacteriocin against Xanthomonas albilineans, a sugar cane pathogen. Research in Microbiology 153: 345–351.

Reis, V.M., Teixeira, K.R.S. (2015). Nitrogen fixing bacteria in the family Acetobacteraceae and their role in agriculture, Journal of Basic Microbiology 54:1-19.

Samaddar, N., Paul, A., Chakravorty, S., Chakraborty, W., Mukheriee, J., Chowdhuri, D., Gachhui, R. (2011). Nitrogen Fixation in Asaia sp. (Family Acetobacteraceae). Current Microbiology 63:226-231.

Tazato, N., Nishijima, M., Handa, Y., Kigawa, R., Sano, C. and Sugiyama, J. (2012). Gluconacetobacter tumulicola sp. nov. and Gluconacetobacter asukensis sp. nov., isolated from the stone chamber interior of the Kitora Tumulus. International Journal of Systematic and Evolutionary Microbiology 62: 2032-2038.

Vu, H.T.L., Yukphan, P., Chaipitakchonlatarn, W., Malimas, T., Muramatasu, Y., Bui, U.T.T., Tanasupawat, S., Duong, K.C., Nakagawa, Y., Pham, H.T. and Yamada, Y. (2013). Nguyenibacter vanlangensis gen. nov., sp. nov., an unusual acetic acid bacterium in the α-Proteobacteria. Journal of General and Applied Microbiology 59: 153-166.

Watanabe, F.S., Olsen, S.R. (1965). Test of an ascorbic acid method for determining phosphorus in water and NaHCO3 extracts from soil. Soil Science Society of American Proceedings, 29:677-678.

Yamada, Y., Hoshino, K., Ishikawa, T. (1997). The phylogeny of acetic acid bacteria based on the partial sequences of 16S ribosomal RNA: The elevation of the subgenus Gluconoacetobacter to the generic level. Bioscience, Biotechnology, and Biochemistry 61:1244-1251.

Yamada, Y., Yukphan, P., Vu, H.T.L, Muramatsu, Y., Ochaikul, D., Tanasupawat, S. and Nakagawa, Y. (2012). Description of Komagataeibacter gen. nov., with proposals of new combinations (Acetobacteraceae). Journal of General and Applied Microbiology 58: 397-404.