DNA barcoding for identification of some fish species (Carangidae) in Vietnam coastal area

Pham The Thu, Nguyen Manh Linh, Nguyen Van Quan, Pham Van Chien, Dao Huong Ly, Le Ba Hoang Hiep
Author affiliations

Authors

  • Pham The Thu Institute of Marine Environment and Resources, VAST, Vietnam
  • Nguyen Manh Linh Institute of Marine Environment and Resources, VAST, Vietnam
  • Nguyen Van Quan Institute of Marine Environment and Resources, VAST, Vietnam
  • Pham Van Chien Institute of Marine Environment and Resources, VAST, Vietnam
  • Dao Huong Ly Institute of Marine Environment and Resources, VAST, Vietnam
  • Le Ba Hoang Hiep VNU University of Sciences, Vietnam National University, Hanoi, Vietnam

DOI:

https://doi.org/10.15625/1859-3097/19/4/14909

Keywords:

DNA barcoding, COI, Carangidae, Vietnam.

Abstract

Carangidae family has got about 148 species belonging to 32 genera. In Vietnam, Carangidae is of high commercial value and playing an important role in the ecosystem. In the context Vietnam has received yellow card for seafood since Nov. 2017 by the EU, in which one of the main reasons was related to the restriction of traceability. In this study, DNA barcoding technique of mitochondrial cytochrome oxidase I (COI) gene was used to classify 56 specimens of Carangidae from three coastal areas (Northern, Central and Southern) in Vietnam to evaluate the effectiveness compared to the morphological classification method. Results showed that 21 species belonging to 16 genera were determined by the COI barcode while 18 species (16 genera) were determined when using morphological method. Seriola quinqueradiata and Trachinotus anak were newly recorded in Vietnam. From 56 sequences with 660 bp of mtDNA (COI), total 27 haplotypes were detected; haplotype diversity (h) and nucleotide diversity (π) were 0.903 ± 0.00060 and 0.14%, respectively. The DNA barcodes of COI gene of 21 species in Carangidae which were developed in this study could be used as a basis for comparison and traceability of their products. In addition, the results showed the high potentiality in using COI barcode to identify Carangidae fish in Vietnam.

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Published

27-03-2020

How to Cite

Thu, P. T., Linh, N. M., Quan, N. V., Chien, P. V., Ly, D. H., & Hiep, L. B. H. (2020). DNA barcoding for identification of some fish species (Carangidae) in Vietnam coastal area. Vietnam Journal of Marine Science and Technology, 19(4), 527–536. https://doi.org/10.15625/1859-3097/19/4/14909

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