Expression of a new serpin gene screening from metagenomics database in \(\textit{Pichia pastoris}\) and some characterization of recombinant protein

Pham Viet Cuong, Tran Thi Hong
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Authors

  • Pham Viet Cuong
  • Tran Thi Hong Viện Hàn lâm khoa học và Công nghệ Việt Nam

DOI:

https://doi.org/10.15625/2615-9023/15741

Keywords:

Pichia pastoris

Abstract

Currently, searching for new protease inhibitors is of interest to many scientists around the world because they play an important role in controlling harmful proteases. As terrestrial bioactive resources are becoming increasingly depleted, studies are aimed at finding other sources, for example, the ocean. Some recent reports indicate that sponge- associated microbes produce substances with high biological activity, such as anticancer and anti-inflammation, protease inhibition, etc. In this report, a new serpin gene screened from the metagenomics database of microorganism-associated Spheciospongia vesparium QT2 collected sea of Quang Tri province (Vietnam), was successful expressed in Pichia pastoris SMD1168. The obtained result showed that the maximum amount of recombinant protein secreted in the medium was received after 72 hours of induction with methanol. The PAGE electrophoresis supplemented with 0.1% casein and the Trypsin-sepharose 4B affinity chromatography column were performed, and the result was confirmed that the recombinant protein expressed in the P. pastoris SMD1168 (molecular weight about 50 kDa) was the target protein. The purified recombinant protein PI-QT exhibited inhibitor activity on trypsin, ɑ-chymotrypsin and thermolysin and the inhibition was 88.7%, 69% and 43%, respectively. In addition, PI-QT protein is stable and has optimal activity in the pH range 7−9, the temperature is below 60 oC.

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References

Abdelmohsen U. R., Szesny M., Othman E. M., Schirmeister T., Grond S., Stopper H., Hentschel U., 2012. Antioxidant and Anti-Protease Activities of Diazepinomicin from the Sponge-Associated Micromonospora Strain RV115. Mar Drugs, 10(10): 2208−2221.

Aguirre C., Valdes-Rodrıguez S., Mendoza-Herna´ndezb G., Rojo-Dom´ınguezc A., Blanco-Labra A., 2004. A novel 8.7 kDa protease inhibitor from chan seeds (Hyptis suaveolens L.) inhibits proteases from the larger grain borer Prostephanus truncatus (Coleoptera: Bostrichidae). Comparative Biochemistry and Physiology, 138: 81−89.

Baharum S. N., Beng E. K., Mokhtar M. A. A., 2010. Marine Microorganisms: Potential Application and Challenges. Journal of Biological Sciences, 10(6): 555−564.

Darby R. A., Cartwright S. P., Dilworth M. V., Bill R. M., 2012. Which yeast species shall I choose? Saccharomyces cerevisiae versus Pichia pastoris. Recombinant Protein Production in Yeast, 11–23.

El-Hadedy D. E., Mostafa E. S. E., Saad M. M., 2015. Streptomyces lavendulae Protease Inhibitor: Purification, Gene Overexpression, and 3-Dimensional Structure. Journal of Chemistry. https://doi.org/10.1155/2015/963041 https://doi.org/10.1155/2015/963041">

Fullana N., Braña V., Marizcurrena J. J., Morales D., Betton J. M., Marín M., Castro-Sowinski S., 2017. Identification, recombinant production and partial biochemical characterization of an extracellular cold-active serine-metalloprotease from an Antarctic Pseudomonas isolate AIMS. Bioengineering, 4(3): 386−401.

Handelsman J., 2004. Metagenomics: application of genomics to uncultured microorganisms. Microbiology and Molecular Biology Reviews, 68: 669−685.

Hoang Thu Ha, Pham Thi Tran Chau, 2008. Research investigated proteinase inhibitors in different parts of the trunk and seeds of the Magnolia (Caesalpinia sappan L.). Journal of Science, VNU, Natural Science and Technology, 24: 261−270 (in Vietnamese with English summary).

Jiang C. J., Hao Z. Y., Zeng R., Shen P. H., Li J. F., Wu B., 2011. Characterization of a Novel Serine Protease Inhibitor Gene from a Marine Metagenome. Mar Drugs, 9: 1487−1501.

Jiang C., Zhang L., Li F., Meng C., Zeng R., Deng J., Wu B., 2017. Characterization of a metagenome-derived protease from contaminated agricultural soil microorganisms and its random mutagenesis. Folia Microbiologica, 62(6): 499−508.

Kathik L., Kumar G., Keswani T., Bhattacharyya A., Chandar S. S., Bhaskara Rao K. V., 2014. Protease Inhibitors from Marine Actinobacteria as a Potential Source for Antimalarial Compound. PloS ONE, 9(3): e90972.

Karuppiah V., Li Z., 2017. Marine Sponge Metagenomics. Springer Handbook of Marine Biotechnology, 457−473.

Kennedy J., Flemer B., Jackson S. A., Lejon D. P., Morrissey J. P., O'Gara F., Dobson A. D., 2010. Marine metagenomics: new tools for the study and exploitation of marine microbial metabolism. Marine drugs, 8(3): 608–628.

Krainer F. W., Dietzsch C., Hajek T., Herwig C., 2012. Recombinant protein expression in Pichia pastoris strains with an engineered methanol utilization pathway. Microbial Cell Factories, 11−22.

Macauley-Patrick S., Fazenda M. L., McNeil B., Harvey L. M., 2005. Heterologous protein production using the Pichia pastoris expression system. Yeast, 22(4): 249−270.

Nguyen Minh Giang, Do Thi Huyen, Truong Nam Hai, 2013. Using informatics tools in researching metagenomics - Research directions and new applications in biology. Scientific Journal of Ho Chi Minh City University of Education: 167−177 (in Vietnamese with English summary).

Pandhare J., Zog K., Deshpande V. V., 2002. Differential stabilities of alkaline protease inhibitors from actinomycetes: Effect of various additives on thermostability. Bioresource Technology, 84(2): 165−169.

Phan Tuan Nghia, Dang Quang Hung, 2004. Purification of trypsin inhibitors (TI) from soybean seeds (Glycine max L.). Journal of Science, VNU, Natural Science and Technology, 20(4): 261−270 (in Vietnamese with English summary).

Pimentel-Elardo S. M., Buback V., Gulder T. A. M., Bugni T. S., Reppart J., Bringmann G., Ireland C. M., Schirmeister T., Hentschel U., 2011. New Tetromycin Derivatives with Anti-Trypanosomal and Protease Inhibitory Activities. Mar Drugs, 9: 1682–1697.

Sapna K., 2013. Isolation, purification, characterization and application of proteinaceous protease inhibitor from marine bacterium Pseudomonas mendocina BTMW 301. PhD Thesis, Cochin University of Science and Technology, Kerala, India, pp. 215.

Sapna K., Ali P. P. M., Mol K. R. R., Bhat S. G., Chandrasekaran M., Elyas K. K., 2017. Isolation, purification and characterization of a pH tolerant and temperature stable proteinaceous protease inhibitor from marine Pseudomonas mendocina. Biotechnology Letters, 39: 1911−1916.

Shamsi T., Fatima S., paveen R., 2016. Characterization, Biomedical and Agricultural applications of Protease Inhibitors: A review. International Journal of Biological Macromolecules, 91: 1−14.

Shakee M., 2020. Molecular identification, characterization, and expression analysis of a serine protease inhibitor gene from cotton bollworm, Helicoverpa armigera (Lepidoptera: Noctuidae). Brazilian Journal of Biology. https://doi.org/10.1590/1519-6984.223579 https://doi.org/10.1590/1519-6984.223579">

Tsybina T., Dunaevsky Y., Musolyamov A., Egorov T., Larionova N., Popykina N., and Belozersky M., 2004. New protease inhibitors from buckwheat seeds: properties, partial amino acid sequences and possible biological role. Biol. Chem., 385: 429−434.

Venkatachalam P. and Nadumane V. K., 2019. Purification and Characterization of a Protease Inhibitor with Anticancer Potential from Bacillus endophyticus JUPR15. Current Cancer Therapy Reviews, 15: 74−82.

Wahyudi A. T., Quatrunnada, Mubarik N. R., 2010. Screening and Characterization of Protease Inhibitors from Marine Bacteria Associated with Sponge Jaspis sp. HAYATI Journal of Biosciences, 17(4): 173−178.

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Published

30-06-2021

How to Cite

Cuong, P. V., & Hong, T. T. (2021). Expression of a new serpin gene screening from metagenomics database in \(\textit{Pichia pastoris}\) and some characterization of recombinant protein. Academia Journal of Biology, 43(2), 73–82. https://doi.org/10.15625/2615-9023/15741

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