Detection of protein stoichiometric phosphorylation using Phos-tag SDS-PAGE

Authors

  • Doan Minh Thu VNUK Institute for Research and Education, University of Danang
  • Nguyen Thi Minh Viet University of Tsukuba
  • Pham Thi Kim Lien

DOI:

https://doi.org/10.15625/1811-4989/17/4/13785

Keywords:

Protein phosphorylation, Phos-tag, Western blotting, phosphate monoester and serine.

Abstract

Protein phosphorylation plays an important role in many cellular signalings which are relating to many diseases. Therefore, a variety of biochemical techniques has been developed to study protein phosphorylation in cells. Protein phosphorylation has traditionally been detected by radioisotope phosphate labeling of proteins with radioactive ATP. Phosphorylation site-specific antibodies are now available for the analysis of phosphorylation status at target sites. However, these antibodies cannot be used to detect unidentified phosphorylation sites. Recently, the Phos-tag technology has been developed to overcome the disadvantages and limitations of these methods. Phos-tag and its derivatives conjugated to biotin, acrylamide, or agarose, and can capture phosphate monoester dianions bound to serine, threonine, and tyrosine residues, in an amino acid sequence-independent manner. The grouping of the Phos-tag will alter the mobility of protein on the gel depending on the amount of serine, threonine or tyrosine which are phosphorylated. Here, we describe the method to detect the phosphorylation of Pop2 protein, one of the exonucleases in the Ccr4-Not complex regulating the shortening of poly(A) tail of mRNAs using phosphate affinity Phos-tag SDS-PAGE. We observed clear electrophoretic 04 shift bands of Pop2-3XFlag under unstressed conditions. This is the first study which observes Pop2 phosphorylation in normal culture conditions. This study showed the convenience and advantages of Phos-tag SDS-PAGE for research on molecular mechanisms regulating the function of protein.

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References

Adams A, Gottschling DE, Kaiser C (1997). Methods in yeast genetics. Cold Spring Harbor Labora- tory Press, Cold Spring Harbor, NY.

Asunori Sugiyama, Syouichi Katayama, Isamu Kameshita, Keiko Morisawa, Takuma Higuchi, Hiroshi Todaka, Eiji Kinoshita, Emiko Kinoshita-Kikuta, Tohru Koike, Taketoshi Taniguchi, Shuji Sakamoto (2015) Expression and phosphorylation state analysis of intracellular protein kinases using Multi-PK antibody and Phos-tag SDS-PAGE. MethodsX 2 (2015) 469–474.

Eiji Kinoshita, Emiko Kinoshita-Kikuta, Kei Takiyama, and Tohru Koike (2006) Phosphate-binding Tag, a New Tool to Visualize Phosphorylated Proteins. Molecular and Cellular Proteomics. 2006 Apr;5(4):749-57.

Hunter (1995) Protein kinases and phosphatases: the yin and yang of protein phosphorylation and signaling. Cell 80, 225–236.

Hunter (2000) Signaling—2000 and beyond. Cell 100, 113–127.

Kushnirov VV (2000) Rapid and reliable protein extraction from yeast. Yeast. 2000; 16(9):857–60.

Sakai A, Chibazakura T, Shimizu Y, Hishinuma F (1992) Molecular analysis of POP2 gene, a gene required for glucose-derepression of gene expression in Saccharomyces cerevisiae. Nucleic Acids Research. 1992; 20(23):6227–33.

Newman RH, Zhang J, Zhu H (2014) Toward a systems-level view of dynamic phosphoryla- tion networks. Front Genet 5:263.

Takahiro Horinouchi, Koji Terada, Tsunehito Higashi, and Soichi Miwa (2016) Using Phos-Tag in Western Blotting Analysis to Evaluate Protein Phosphorylation. Methods in Molecular Biology, vol. 1397.

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Published

2020-11-02

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Articles